Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931990.1_cds_XP_016478616.1_70240
CDS Infomation

[gene=LOC107799988] [db_xref=GeneID:107799988] [protein=SRSF protein kinase 1-like] [protein_id=XP_016478616.1] [location=join(58465..58650,59681..60469,60711..60758,60850..61170)] [gbkey=CDS]
Sequence

ATGTCTTGCTCATCATCGTCGTCGGCGTCGGAGGATGAAGATGAGGGATTCGATTCTTAC
AGGAAAGGAGGATACCATGCGGTGAGAGTCGGCGATTCATTCTCCGGTGGCCGATATATC
GCTCAGCGAAAACTCGGCTGGGGAGAGTTCTCCACTGTTTGGCTCGCTTATGATACTCGA
TCATCCGAATATGTTGCTTTGAAGATCCAGAAAAGTGCACCACAATTTGCTCAAGCAGCT
CTTCATGAAATTGAAGTCCTTTCTGCGATTGCCAATGGTGATCCATCGAATAGTAAATAT
GTTGTACGACTTATTGACCATTTTAGGCACACTGGCCCTAACGGGCAGCACTTATGCATG
GTTCTTGAATTCCTTGGCGATAGCTTATTGAGGCTGGTCAAATATAATCGCTATAAGGGC
CTTGAAATGAATAAAGTTAGGGAAATATGCAAATGTGTTTTGACTGGTTTAGATTATTTG
CATAGGGGACTTGGAATTATTCATACAGACTTGAAACTTGAAAATATTCTTTTACTTTCT
ACAATTAATGCCACAAAAGATCCCATTAGATCCGGAATGACTCCCATCCTTGAAAGGCCT
GAGGGGAACCCTAATGGAGGAGTAACAATGAATATCATTGAGAAAAAGCTAAAGCAAAGG
GCAAGGAGAGCAGCAGCTAGGATATCTGGAAGACGGTCTTCAATGGGTGGGGTAGGAGGG
ACTCCAAAATCAAATAGATCCCTTGATGGGATTGACTTGAGGTGCAAGGTTGTGGATTTT
GGAAATGCATGCTGGGCTGATAAGCAGTTTGCGCAAGAAATTCAAACAAGGCAGTACAGA
TCCCCTGAAGTTATACTTCAATCTGGATATTCATTCTCTGCTGACATGTGGTCTTTTGCT
TGTATTGCATTTGAGCTTGCTACTGGTGAGATGATGTTCACTCCCAAAGGTGGACAAGGT
TTCAATGAGGATGAGGATCATCTAGCTATGATGATGGAGCTTCTAGGGAAGATCCCTCGG
AAGATAGCCATTGGTGGGGCTAGATCCAAAGATTACTTTGACAGGCACGGAGATCTGAAG
AGGATCCGTAGGCTGAAATATGGTTCTCTAGATAAATTGCTAGTTGACAAGTTTAGGTTT
TCTGAAATTGATGCCCATGAGTTCGCCGAATTTCTTGGTCCTCTTCTTGATTTTGAGCCA
GAGAAACGACCAACTGCTGAGCAGTTCTTGCAACACCCGTGGCTCAACTTTAAAAATCTT
AAGAAAACAGAGGTGAAGAGTGAATCAGGTCTGGAAAAGGTTAATGTCGGAATGAGCAAG
CTACAGATTAAGGTGGGTAAGTGA

Peptide Sequence

PEP ID

XP_016478616.1
PEP Infomation

PREDICTED: SRSF protein kinase 1-like [Nicotiana tabacum]
Sequence

MSCSSSSSASEDEDEGFDSYRKGGYHAVRVGDSFSGGRYIAQRKLGWGEFSTVWLAYDTR
SSEYVALKIQKSAPQFAQAALHEIEVLSAIANGDPSNSKYVVRLIDHFRHTGPNGQHLCM
VLEFLGDSLLRLVKYNRYKGLEMNKVREICKCVLTGLDYLHRGLGIIHTDLKLENILLLS
TINATKDPIRSGMTPILERPEGNPNGGVTMNIIEKKLKQRARRAAARISGRRSSMGGVGG
TPKSNRSLDGIDLRCKVVDFGNACWADKQFAQEIQTRQYRSPEVILQSGYSFSADMWSFA
CIAFELATGEMMFTPKGGQGFNEDEDHLAMMMELLGKIPRKIAIGGARSKDYFDRHGDLK
RIRRLKYGSLDKLLVDKFRFSEIDAHEFAEFLGPLLDFEPEKRPTAEQFLQHPWLNFKNL
KKTEVKSESGLEKVNVGMSKLQIKVGK

Transcript Sequence

Gene sequence data has not been registered.